poreana.utilsΒΆ

Here popular basic methods are noted.

Functions

column(data) Convert given row list matrix into column list matrix
file_to_text(link, link_output[, link_dens]) This function converts an output directory in txt file.
load(link[, file_type]) Load pickled object files, yaml files, and hd5 files.
mkdirp(directory) Create directory if it does not exist.
mmol_g_to_mumol_m2(c, SBET) Convert the concentration \(\frac{\text{mmol}}{\text{g}}\) to \(\frac{\mu\text{mol}}{\text{m}^2}\).
mmol_l_to_mols(c, V) Convert the concentration in \(\frac{\text{mmol}}{\text{l}}\) to number of molecules.
mols_to_mmol_l(N, V) Convert the number of molecules to concentration in \(\frac{\text{mmol}}{\text{l}}\).
mols_to_mumol_m2(N, A) Convert the number of molecules to concentration in \(\frac{\mu\text{mol}}{\text{m}^2}\).
mumol_m2_to_mols(c, A) Convert the concentration in \(\frac{\mu\text{mol}}{\text{m}^2}\) to number of molecules.
num_dens_to_mass_dens(dens) Convert number density
save(obj, link) Save an object files, yaml files, and hd5 files using pickle in the specified link.
tic() MATLAB tic replica - return current time.
toc(t[, message, is_print]) MATLAB toc replica - return time difference to tic and alternatively print a message.