Model¶

class poreana.model.Model(link)¶

This class sets the general parameters which are used to initialize a model.

Parameters:

linkstring: Data link to the hdf5, obj or yml data file from poreana.sample.Sample.init_diffusion_mc()

Methods

`__class__`	alias of `type`
`__delattr__`(name, /)	Implement delattr(self, name).
`__dict__`
`__dir__`(/)	Default dir() implementation.
`__doc__`
`__eq__`(value, /)	Return self==value.
`__format__`(format_spec, /)	Default object formatter.
`__ge__`(value, /)	Return self>=value.
`__getattribute__`(name, /)	Return getattr(self, name).
`__gt__`(value, /)	Return self>value.
`__hash__`(/)	Return hash(self).
`__init__`(link)
`__init_subclass__`	This method is called when a class is subclassed.
`__le__`(value, /)	Return self<=value.
`__lt__`(value, /)	Return self<value.
`__module__`
`__ne__`(value, /)	Return self!=value.
`__new__`(args, *kwargs)
`__reduce__`(/)	Helper for pickle.
`__reduce_ex__`(protocol, /)	Helper for pickle.
`__repr__`(/)	Return repr(self).
`__setattr__`(name, value, /)	Implement setattr(self, name, value).
`__sizeof__`(/)	Size of object in memory, in bytes.
`__str__`(/)	Return str(self).
`__subclasshook__`	Abstract classes can override this to customize issubclass().
`__weakref__`	list of weak references to the object (if defined)
`_calc_profile`(coeff, basis)	This function calculates the diffusion and free energy profile over the bins.
`_init_profiles`()	This function initializes the normal diffusion, radial diffusion and free energy profile over the bins.