poreana.diffusion.
mc_trans_mat
(link, step, kwargs={}, is_norm=False, is_diagonal=False, is_length=True, limit=0)¶This function plots the occupation of a normalized transition matrix as a heatmap. To normalize the transition matrix the number of the frame are used. This means that all entries in the transition matrix are divided by the total number of frames which are used to estimate the matrix.
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